The detailed information of tRNA gene sequence


Sequence ID>WENV180297429
Genome IDOBJA01030714
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 1364
End posion on genome 1290
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccaaatcca
tRNA gene sequence 
GGCGGGGTAGCTCAGGTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAC
TCCCGTCTCCGCTACta
Downstream region at tRNA end position 
tctgggattt
Secondary structure (Cloverleaf model)
>WENV180297429	Met	CAT
                   a      ACta tctgggattt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T C
                    T     T G C C C     A
      G G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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