The detailed information of tRNA gene sequence


Sequence ID>WENV180297445
Genome IDOBJA01032561
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 199
End posion on genome 124
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
caattcaggt
tRNA gene sequence 
TGCGGGATAGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCGAAT
CCAACTCCCGCGACCA
Downstream region at tRNA end position 
tttttttttg
Secondary structure (Cloverleaf model)
>WENV180297445	fMet	CAT
                   t      ACCA tttttttttg
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C G A G       G T T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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