The detailed information of tRNA gene sequence


Sequence ID>WENV180297507
Genome IDOBJA01037715
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 458
End posion on genome 365
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gacccttcgc
tRNA gene sequence 
GGAAGCGTATCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGGCGGTCGAGAGGT
CGCCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
tctttccttc
Secondary structure (Cloverleaf model)
>WENV180297507	SeC	TCA
                   c      GCCA tctttccttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGGCGGTCGAGAGGTCGCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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