The detailed information of tRNA gene sequence


Sequence ID>WENV180297675
Genome IDOBJA01061546
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 245
End posion on genome 337
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcacaaac
tRNA gene sequence 
GGAGAAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGCGTGTGAGC
GCCGCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
cgatgtcaaa
Secondary structure (Cloverleaf model)
>WENV180297675	Ser	TGA
                   c      GCCA cgatgtcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGCGTGTGAGCGCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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