The detailed information of tRNA gene sequence


Sequence ID>WENV180297702
Genome IDOBJA01064964
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 134
End posion on genome 59
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttccagcctt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAGT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
ggcgccgttt
Secondary structure (Cloverleaf model)
>WENV180297702	Trp	CCA
                   t      GCCA ggcgccgttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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