The detailed information of tRNA gene sequence


Sequence ID>WENV180297785
Genome IDOBJA01084598
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 500
End posion on genome 407
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgacccgaga
tRNA gene sequence 
GGAAGCATATCGTCACCGGTGTGGCGCCCGGACTTCAAATCCGGTGGACGGTCGAAAGGT
CGTCGGTAGGTTCGACTCCTATATGCTTCCGCCA
Downstream region at tRNA end position 
tgattgccga
Secondary structure (Cloverleaf model)
>WENV180297785	SeC	TCA
                   a      GCCA tgattgccga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAAAGGTCGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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