The detailed information of tRNA gene sequence


Sequence ID>WENV180297817
Genome IDOBJA01092201
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 379
End posion on genome 283
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgggtcattt
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTATCCTCTGGTCTTCAAAACCAGTACGAGGGGTTAGGAG
CCTCTTGGGTGGGTTCGATTCCCACGTACTCCCGCCA
Downstream region at tRNA end position 
aaaaacaccg
Secondary structure (Cloverleaf model)
>WENV180297817	SeC	TCA
                   t      GCCA aaaaacaccg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   G          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       | + | |                 T T
    T       A T C C
      G T          T     TACGAGGGGTTAGGAGCCTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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