The detailed information of tRNA gene sequence


Sequence ID>WENV180297833
Genome IDOBJA01096691
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 571
End posion on genome 646
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggtggcac
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCAAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
aatttattga
Secondary structure (Cloverleaf model)
>WENV180297833	Trp	CCA
                   c      GCCA aatttattga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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