The detailed information of tRNA gene sequence


Sequence ID>WENV180297946
Genome IDOBJA01120573
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 197
End posion on genome 123
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
accctgatcc
tRNA gene sequence 
TGCGGGGTAGGGAAGCGGCATCCCGTCGGCTTCATACGCCGAAGGTCGCCAGTTCGAGTC
TGGCTCCCGCAACCA
Downstream region at tRNA end position 
gttcaatcgg
Secondary structure (Cloverleaf model)
>WENV180297946	fMet	CAT
                   c      ACCA gttcaatcgg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G G T C     A
        G A        A      | | | | |     G
      C     A G G G       G C C A G     C
      G     | | | |                 T T
      G     T C C C
        C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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