The detailed information of tRNA gene sequence


Sequence ID>WENV180298294
Genome IDOBJA01257994
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 293
End posion on genome 381
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccaaaacT
tRNA gene sequence 
GGAGAGGTGTCGGAGCGGCTGATCGAGCTGGTTTCGAAAACCAGTGTACTCGTAAGAGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGTtt
Downstream region at tRNA end position 
tttctttgtc
Secondary structure (Cloverleaf model)
>WENV180298294	Ser	CGA
                   T      GTtt tttctttgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T G A        G     TGTACTCGTAAGAGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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