The detailed information of tRNA gene sequence


Sequence ID>WENV180298322
Genome IDOBJA01275467
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 215
End posion on genome 310
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtatagcct
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGACGAAGGCGCTCGCCTGGAAAGCGAGTAGACGGGGCAAAAC
CTTGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cttgtttatt
Secondary structure (Cloverleaf model)
>WENV180298322	Ser	GGA
                   t      GCCA cttgtttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  A         A G G C
    C G A          G     TAGACGGGGCAAAACCTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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