The detailed information of tRNA gene sequence


Sequence ID>WENV180298374
Genome IDOBJA01302208
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 343
End posion on genome 248
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatactaggt
tRNA gene sequence 
GGGAGTAGATGTCTGCCTGGTGTGGGCCCCGGACTTCAAATCCGGTGGCGGGTGCGACCC
GTCCGTGGTGGGTTCGATTCCCACCTACTCCCGCCA
Downstream region at tRNA end position 
actttatata
Secondary structure (Cloverleaf model)
>WENV180298374	SeC	TCA
                   t      GCCA actttatata
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    A     C A C C C     A
      C C G        T      | | | | |     G
    T       T C T G       G T G G G     C
    G       + | + |                 T T
    G       G G G C
      T G T        C     TGGCGGGTGCGACCCGTCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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