The detailed information of tRNA gene sequence


Sequence ID>WENV180298387
Genome IDOBJA01309840
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 253
End posion on genome 163
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataataatac
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCGTGAGAGCG
CGCGCGGGTTCAAATCCTGCTTCCTCCGCCA
Downstream region at tRNA end position 
ttttaatatt
Secondary structure (Cloverleaf model)
>WENV180298387	Ser	TGA
                   c      GCCA ttttaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | + | |     A
  C         A C C C       G C G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGTGAGAGCGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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