The detailed information of tRNA gene sequence


Sequence ID>WENV180298478
Genome IDOBJA01367518
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 297
End posion on genome 207
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacattggtt
tRNA gene sequence 
GGAGTAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGCTGGGAAACCGG
TGCGAGGGTTCAAATCCCTCCTGCTCCGCCA
Downstream region at tRNA end position 
tcaatggccc
Secondary structure (Cloverleaf model)
>WENV180298478	Ser	GCT
                   t      GCCA tcaatggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGCTGGGAAACCGGTGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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