The detailed information of tRNA gene sequence


Sequence ID>WENV180298551
Genome IDOBJA01413637
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 298
End posion on genome 225
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnctccacat
tRNA gene sequence 
CGCGGGGTGGAGCAGAAGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCAGTTCGAGT
CTGACCCCCGCTACta
Downstream region at tRNA end position 
aaaagagaga
Secondary structure (Cloverleaf model)
>WENV180298551	fMet	CAT
                   t      ACta aaaagagaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A G T C     A
      A G A        G      | | | | |     G
    A       C G A G       G T C A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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