The detailed information of tRNA gene sequence


Sequence ID>WENV180298736
Genome IDOBJA01573244
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 120
End posion on genome 213
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taggtcatct
tRNA gene sequence 
GGGAGTAGTTAGCGGCCTGGTGGCGCTCCTGGACTTCAAATCCAGTGGCAGGGCAGCCCC
CTGCGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
gtgtatcaac
Secondary structure (Cloverleaf model)
>WENV180298736	SeC	TCA
                   t      GCCA gtgtatcaac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C C G        T      + | | | |     G
    T       G C G A       G T G G G     C
    G       | | | |                 T T
    G       C G C T
      T G G        C     TGGCAGGGCAGCCCCCTGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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