The detailed information of tRNA gene sequence


Sequence ID>WENV180298745
Genome IDOBJA01580415
Search identical group
Phylum/Class[OBJA] soil metagenome; sediment, water from around vicinity
Species
Start position on genome 23
End posion on genome 119
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agcaaattaa
tRNA gene sequence 
GGGGGTAGATGGGTGCTGGTGTGCCCTCTGGTCTTCAAAACCAGCATGGGGAGTTGGTAG
CTTCCTGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
tttaagtata
Secondary structure (Cloverleaf model)
>WENV180298745	SeC	TCA
                   a      GCCA tttaagtata
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     CATGGGGAGTTGGTAGCTTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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