The detailed information of tRNA gene sequence


Sequence ID>WENV180312672
Genome IDOBJZ01000040
Search identical group
Phylum/Class[OBJZ] human gut metagenome; fecal sample
Species
Start position on genome 76579
End posion on genome 76673
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attcgtgctt
tRNA gene sequence 
GGAGGCGTACGTGTCCTGGTGGGCGCCCCGGTCTTCAAAACCGGTGATATCGAGTAGCTC
GGTATGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
agctttcgcg
Secondary structure (Cloverleaf model)
>WENV180312672	SeC	TCA
                   t      GCCA agctttcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      T C C        C      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     TGATATCGAGTAGCTCGGTATG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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