The detailed information of tRNA gene sequence


Sequence ID>WENV180316874
Genome IDOBKJ01000625
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 1598
End posion on genome 1673
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattatttat
tRNA gene sequence 
AGGTCAGTAGCTCAGTTGGTAGAGTATCGGTCTCCAAAACCGAGTGTCGTGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttttcaaa
Secondary structure (Cloverleaf model)
>WENV180316874	Trp	CCA
                   t      GCCA ttttttcaaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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