The detailed information of tRNA gene sequence


Sequence ID>WENV180317084
Genome IDOBKJ01017952
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 314
End posion on genome 406
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatcatctcc
tRNA gene sequence 
GGAGAGGTGACCGAGCTGGCTGAAGGTGCGCGCCTGCTAAGCGTGTGTGGGGATAACACC
TCACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatcattccc
Secondary structure (Cloverleaf model)
>WENV180317084	Ser	GCT
                   c      GCCA gatcattccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    T G A          G     TGTGGGGATAACACCTCACC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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