The detailed information of tRNA gene sequence


Sequence ID>WENV180317211
Genome IDOBKJ01060349
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 221
End posion on genome 127
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcaaaaatgc
tRNA gene sequence 
GGGGGGTATCTGACCCTGGTGGGCAGCTTGGGCTTCAAACCCAATGTCTGGGCAGCTGGC
TGTCTGGAGGTAGGTTCGATTCCTACACCTTCTCGcc
Downstream region at tRNA end position 
gatatcttta
Secondary structure (Cloverleaf model)
>WENV180317211	SeC	TCA
                   c      CGcc gatatcttta
                     G + T
                     G - C
                     G + T
                     G + T
                     G - C
                     G - C
                     T - A          T T
                    A     C A T C C     A
      C C C        T      | | | | |     G
    T       A G T C       G T A G G     C
    G         | | |                 T T
    G       G C A G
      T G G        C     TGTCTGGGCAGCTGGCTGTCTGGAG
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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