The detailed information of tRNA gene sequence


Sequence ID>WENV180317297
Genome IDOBKJ01103044
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 90
End posion on genome 179
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcatcctat
tRNA gene sequence 
GGACGAGTGGGTGAGTGGCTGAAACCACATCCCTGCTAAGGATGCGTACTGGTAACGGTA
CCGAGAGTTCAAATCTCTCCTCGTCCGCCA
Downstream region at tRNA end position 
tcaacaaacc
Secondary structure (Cloverleaf model)
>WENV180317297	Ser	GCT
                   t      GCCA tcaacaaacc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     A
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGTAACGGTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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