The detailed information of tRNA gene sequence


Sequence ID>WENV180317341
Genome IDOBKJ01123216
Search identical group
Phylum/Class[OBKJ] metagenome; hydrothermal vent
Species
Start position on genome 12
End posion on genome 107
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaatcaccac
tRNA gene sequence 
GGAGGTAGTTAGTTCTCTGGTGAGGCTCACGGTCTTCAAAACCGATGGGGGGCGCATCCC
GTCCCTGGTGAGTTCGATTCTCATCTACCTCCGCCA
Downstream region at tRNA end position 
atctaaaaag
Secondary structure (Cloverleaf model)
>WENV180317341	SeC	TCA
                   c      GCCA atctaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C T C     A
      C T C        T      + | | | |     G
    T       T T G A       G T G A G     C
    G       + + | |                 T T
    G       G G C T
      T G A        C     TGGGGGGCGCATCCCGTCCCTG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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