The detailed information of tRNA gene sequence


Sequence ID>WENV180320667
Genome IDOBKQ01005525
Search identical group
Phylum/Class[OBKQ] soil metagenome; Clay
Species
Start position on genome 882
End posion on genome 785
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acgtcgctac
tRNA gene sequence 
GGAGGCGAATGGGGTCCGGTGATCCTCCCGGCCTTCAAAGCCGGCGATCCGGCTCTTGCG
AGCCGGATGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
agtcgtctcg
Secondary structure (Cloverleaf model)
>WENV180320667	SeC	TCA
                   c      GCCA agtcgtctcg
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     A   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       + | | +                 T T
    T       T C C T
      G A          C     CGATCCGGCTCTTGCGAGCCGGATG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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