The detailed information of tRNA gene sequence


Sequence ID>WENV180332711
Genome IDOBLD01108349
Search identical group
Phylum/Class[OBLD] metagenome; water
Species
Start position on genome 176
End posion on genome 78
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agaattactt
tRNA gene sequence 
GGGGGTGGTTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTCTGAGGGGTGCTGCAG
AGGCAGCCCTGGGGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
ttctatgtgt
Secondary structure (Cloverleaf model)
>WENV180332711	SeC	TCA
                   t      GCCt ttctatgtgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      +   | | |     G
    G       T G A G       G G G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     CTGAGGGGTGCTGCAGAGGCAGCCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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