The detailed information of tRNA gene sequence


Sequence ID>WENV180341478
Genome IDOBLI01136631
Search identical group
Phylum/Class[OBLI] pig gut metagenome; faeces
Species
Start position on genome 8
End posion on genome 104
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnntaaataa
tRNA gene sequence 
GGAAGTAGCTGAGAAACTGGTGTTCTTCACGGTCTTCAAAACCGATGTGAGGTAGTCTTC
TATCTCTGGTGGGTTCGATTCCCACATACTTCCGCCA
Downstream region at tRNA end position 
aaagcaaagg
Secondary structure (Cloverleaf model)
>WENV180341478	SeC	TCA
                   a      GCCA aaagcaaagg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    C     C A C C C     A
      C A A        T      | | | | |     G
    T       A G A G       G T G G G     C
    G       | | | +                 T T
    G       T C T T
      T G T        C     TGTGAGGTAGTCTTCTATCTCTG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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