The detailed information of tRNA gene sequence


Sequence ID>WENV180341961
Genome IDOBLI01311983
Search identical group
Phylum/Class[OBLI] pig gut metagenome; faeces
Species
Start position on genome 125
End posion on genome 29
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctgagcccat
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGCCCCCCGGTCTTCAAAACCGGTGATAGGGGTGAAGAG
CCTCTAAGGTGAGTTCGATCCTCACATGCTCCCGCCA
Downstream region at tRNA end position 
gtgccccgca
Secondary structure (Cloverleaf model)
>WENV180341961	SeC	TCA
                   t      GCCA gtgccccgca
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G   A          C T
                    A     C A C T C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G A G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGATAGGGGTGAAGAGCCTCTAAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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