The detailed information of tRNA gene sequence


Sequence ID>WENV180342464
Genome IDOBLJ01025992
Search identical group
Phylum/Class[OBLJ] soil metagenome; Clay
Species
Start position on genome 112
End posion on genome 16
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccatccagcc
tRNA gene sequence 
GGGAGTGGGTGTCGGCCGGTGCCGGCCCTCGTCTTCAAAACGGGTGACGCGGCGTTCCGC
GCGGCGTGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
gcgaggaccg
Secondary structure (Cloverleaf model)
>WENV180342464	SeC	TCA
                   c      GCCA gcgaggaccg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G   G          T C
                    G     T A C C C     A
      C C G        T      + | | | |     G
    G       G C T G       G T G G G     C
    G       | | + |                 T T
    T       C G G C
      G C          C     TGACGCGGCGTTCCGCGCGGCGTG
                    C - G
                    T + G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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