The detailed information of tRNA gene sequence


Sequence ID>WENV180344083
Genome IDOBLK01221142
Search identical group
Phylum/Class[OBLK] soil metagenome; Clay
Species
Start position on genome 220
End posion on genome 316
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtcgccggt
tRNA gene sequence 
GGAAGTGCGTCCTGGACTGGTGCCGGGCTCGGTCTTCAAAACCGATGGTGGTCCGTGAGA
GCGGCGCCACGGCGGGTTCGATTCCCGTGCACTTCCGttt
Downstream region at tRNA end position 
cttcctgctg
Secondary structure (Cloverleaf model)
>WENV180344083	SeC	TCA
                   t      Gttt cttcctgctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T G C C C     A
      C A G        T      + | | | |     G
    T       G T C C       G C G G G     C
    G       | + | |                 T T
    G       C G G G
      T G C        C     TGGTGGTCCGTGAGAGCGGCGCCACG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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