The detailed information of tRNA gene sequence


Sequence ID>WENV180344095
Genome IDOBLK01227139
Search identical group
Phylum/Class[OBLK] soil metagenome; Clay
Species
Start position on genome 255
End posion on genome 351
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aggcggacac
tRNA gene sequence 
GGGGGTGTCTGGGGCCTGGTGGCTCTCGTCGTCTTCAAAACGATTGTGACCTGACTTCGT
CGGGTCGGGTGGGTTCGATTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
ccgactgccc
Secondary structure (Cloverleaf model)
>WENV180344095	SeC	TCA
                   c      GCCA ccgactgccc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    C     T A C C C     A
      T C C        T      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | +                 T T
    T       C T C T
      G G          C     TGTGACCTGACTTCGTCGGGTCGG
                    G + T
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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