The detailed information of tRNA gene sequence


Sequence ID>WENV180351164
Genome IDOBLQ010030369
Search identical group
Phylum/Class[OBLQ] soil metagenome; soil
Species
Start position on genome 1665
End posion on genome 1759
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgttgtcttc
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGCCTCCCCGGTCTTCAAAACCGCGTGGTCCCGCTCAGGC
GGGACGGAGGGTTCGACTCCCTTCCTTCTCCGCCA
Downstream region at tRNA end position 
atcaaaagaa
Secondary structure (Cloverleaf model)
>WENV180351164	SeC	TCA
                   c      GCCA atcaaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     T T C C C     A
      C C C        T      + | | | |     G
    G       G G G G       G A G G G     C
    G       | | + |                 T T
    T       C C T C
      G G          C     GTGGTCCCGCTCAGGCGGGACG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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