The detailed information of tRNA gene sequence


Sequence ID>WENV180351619
Genome IDOBLQ010079124
Search identical group
Phylum/Class[OBLQ] soil metagenome; soil
Species
Start position on genome 546
End posion on genome 448
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tactatacca
tRNA gene sequence 
CGGAAGGGGATAGGGCCCGGTGGCCCTGCAGGTCTTCAAAACCTGTTTGGTCTTCTGTCT
CAGGAGATCGGGGGGTTCGACTCCCTCCCCCTTCCGCCAc
Downstream region at tRNA end position 
ttactttctt
Secondary structure (Cloverleaf model)
>WENV180351619	SeC	TCA
                   a      CCAc ttactttctt
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          C T
                    G     C C T C C     C
      C C G        A      | | + |       A
    C       G G A T       G G G G T     G
    G       | |                     T C
    G       C C C T
      T G G        G     TTTGGTCTTCTGTCTCAGGAGATCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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