The detailed information of tRNA gene sequence


Sequence ID>WENV180354870
Genome IDOBNE01025988
Search identical group
Phylum/Class[OBNE] groundwater metagenome; groundwater
Species
Start position on genome 87
End posion on genome 182
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaatttcttt
tRNA gene sequence 
GGAGAGGAAACGATCCTGGTGGGTCGGCCGGGCTTCAAACCCGGTGGGTGGCGCCATGCG
CTGCTGGGTGGGTTCGACTCCCATTCCTCTCCGCCA
Downstream region at tRNA end position 
ttgttgaggc
Secondary structure (Cloverleaf model)
>WENV180354870	SeC	TCA
                   t      GCCA ttgttgaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T C
                    A     T A C C C     A
      T C C        A      + | | | |     G
    G       T A G C       G T G G G     C
    G       + | | |                 T T
    T       G T C G
      G G          G     TGGGTGGCGCCATGCGCTGCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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