The detailed information of tRNA gene sequence


Sequence ID>w003031
Genome IDAACJ01000021
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHistophilus somni 2336 [AACJ]
Start position on genome 43113
End posion on genome 43191
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaatgataT
tRNA gene sequence 
GGCTATGTAGCTCAGTTGGTTAGAGCACAACACTCATAATGTTGGGGTCACAGGTTCGAA
TCCCGTCATAGCCACCA
Downstream region at tRNA end position 
Tgtttgcggg
Secondary structure (Cloverleaf model)
>w003031	Met	CAT
                   T      ACCA Tgtttgcggg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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