The detailed information of tRNA gene sequence


Sequence ID>w003005
Genome IDAABW01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia sibirica 246 [AABW]
Start position on genome 1090226
End posion on genome 1090150
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttgtatttaA
tRNA gene sequence 
GCGGGTGTAGCTCAGGGGTAGAGCGCTACCTTGCCAAGGTTGAAGTCGAGGGTTCGAATC
CCTTCACCCGCTCCA
Downstream region at tRNA end position 
Gtgattttgt
Secondary structure (Cloverleaf model)
>w003005	Gly	GCC
                   A      TCCA Gtgattttgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     G
      G     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AAGTC
                    C - G
                    T   T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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