The detailed information of tRNA gene sequence


Sequence ID>WENV180371217
Genome IDOBOI01000797
Search identical group
Phylum/Class[OBOI] sediment metagenome; sediment
Species
Start position on genome 3352
End posion on genome 3441
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttgctttt
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGTTGAATGGGGCGGTCTCGAAAACCGTTGTGGGTGCAAGCCTA
CCGAAGGTTCGAATCCTTCACTCTCCGCCA
Downstream region at tRNA end position 
attttttccc
Secondary structure (Cloverleaf model)
>WENV180371217	Ser	CGA
                   t      GCCA attttttccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A A G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGGTGCAAGCCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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