The detailed information of tRNA gene sequence


Sequence ID>WENV180372319
Genome IDOBOI01057629
Search identical group
Phylum/Class[OBOI] sediment metagenome; sediment
Species
Start position on genome 433
End posion on genome 338
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gctctgaccc
tRNA gene sequence 
GGGAGCGGATGGGTCCTGGTGGGCTTCGCGGGCTTCAAACCCGTTGGTGGGTGCCCTTCG
GCATCCACGGTAGGTTCGACTCCTACCCGCTCCCGCtt
Downstream region at tRNA end position 
ttcctgaggt
Secondary structure (Cloverleaf model)
>WENV180372319	SeC	TCA
                   c      GCtt ttcctgaggt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    A     C A T C C     A
      T C C        T      | | | | |     G
    G       T G G G       G T A G G     C
    G       + | + +                 T T
    T       G C T T
      G G          C     TGGTGGGTGCCCTTCGGCATCCACG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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