The detailed information of tRNA gene sequence


Sequence ID>w002218
Genome IDAAAX02000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. pastoris str. CCMP1378 [AAAX]
Start position on genome 914447
End posion on genome 914523
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
agtaaaaata
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACCACTTTGGGGTAGTGGGGGTCGTGGGTTCAAA
TCCCGCCGTTCCGATTA
Downstream region at tRNA end position 
agattcagta
Secondary structure (Cloverleaf model)
>w002218	Pro	GGG
                   a      ATTA agattcagta
                     C - G
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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