The detailed information of tRNA gene sequence


Sequence ID>WENV180398230
Genome IDOBQA01002031
Search identical group
Phylum/Class[OBQA] marine metagenome; PVDF and polycarbonate filters
Species
Start position on genome 1327
End posion on genome 1416
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcttcattc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCTACCTTGGAAAGGTAGTAACTGGGCAACTGGT
TCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
ttgtgtattt
Secondary structure (Cloverleaf model)
>WENV180398230	Ser	GGA
                   c      GCCA ttgtgtattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAACTGGGCAACTGGTTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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