The detailed information of tRNA gene sequence


Sequence ID>w000550
Genome IDABBV01004235
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM7 single-cell isolate TM7a TM7 isolate TM7a [ABBV]
Start position on genome 1
End posion on genome 81
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGTTGTAGCTACAGTTGGTTAGTAGTTGCTTGCCTGTCACGCAAGATGTCGCGAGTT
CGAGTCTCGTCACTTCCGCCA
Downstream region at tRNA end position 
tttgcccaga
Secondary structure (Cloverleaf model)
>w000550	Asp	GTC
                   n      GCCA tttgcccaga
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     T - A
                     T   C          T G
                    G     T G C T C     A
    G A C A        T      + | | | |     G
  T         T C G A       G C G A G     C
  T         +                       T T
  G         G T A G
    G T T A        T     AGATGTC
                    T - A
                    G - C
                    C - G
                    T   C
                    T - A
                  G       C
                  C       T
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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