The detailed information of tRNA gene sequence


Sequence ID>W141099968
Genome IDAVJV01000023
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile DA00212 [AVJV]
Start position on genome 110432
End posion on genome 110522
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atagagatat
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTCAAGAGGATCCCCTGCTAAGGGATTAGGCTGGGTAACCGG
TGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
attattaaag
Secondary structure (Cloverleaf model)
>W141099968	Ser	GCT
                   t      GCCA attattaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T C A        G     TAGGCTGGGTAACCGGTGC
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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