The detailed information of tRNA gene sequence


Sequence ID>W141106124
Genome IDAVPH01000110
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPseudogulbenkiania ferrooxidans EGD-HP2 [AVPH]
Start position on genome 2336
End posion on genome 2252
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcacgatgtc
tRNA gene sequence 
GCCCGGATGGCGAAATTGGTAGACGCAGGGGATTCAAAATCCCCCGCCGCAAGGTGTGTC
GGTTCGAGTCCGACTCTGGGCACCA
Downstream region at tRNA end position 
caagacatca
Secondary structure (Cloverleaf model)
>W141106124	Leu	CAA
                   c      ACCA caagacatca
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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