The detailed information of tRNA gene sequence


Sequence ID>W141106653
Genome IDAVPW01000022
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus VPCR-2010 [AVPW]
Start position on genome 423141
End posion on genome 423233
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
catttacact
tRNA gene sequence
GGAGAGATGGCAGAGCGGCTGAATGCACTAGCTTGGAAAGCTAGCAGGCGCAGAGAATGC
GCCTCGCGGGTTCGAACCCCGCTCTCTCCGCCA
Downstream region at tRNA end position
aacttgcatc
Secondary structure (Cloverleaf model)
>W141106653	Ser	GGA
                   t      GCCA aacttgcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CAGGCGCAGAGAATGCGCCTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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