The detailed information of tRNA gene sequence


Sequence ID>WENV181172680
Genome IDOEIV010913619
Search identical group
Phylum/Class[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
Species
Start position on genome 103
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcgcgccct
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTCAGAGCACCGGTCTCCAAACCCGGGGGTTGGGGGTTCGAG
CCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gggtttttgc
Secondary structure (Cloverleaf model)
>WENV181172680	Trp	CCA
                   t      GCCA gggtttttgc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T   C
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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