The detailed information of tRNA gene sequence


Sequence ID>WENV181190472
Genome IDOEPL01000268
Search identical group
Phylum/Class[OEPL] activated sludge metagenome; activated sludge
Species
Start position on genome 775
End posion on genome 681
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatgcctct
Secondary structure (Cloverleaf model)
>WENV181190472	SeC	TCA
                   n      GCCA aaatgcctct
                     C   C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          C T
                    C     G T G T C     C
      C T C        G      | |   +       A
    C       T G C T       C A G G T     G
    G       +     +                 T C
    G       G G C G
      T G A        G     TTGGGGCCGCCAGCGGTCCCGGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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