The detailed information of tRNA gene sequence


Sequence ID>WENV181200176
Genome IDOERJ01003641
Search identical group
Phylum/Class[OERJ] metagenome; water of meat washing
Species
Start position on genome 1088
End posion on genome 992
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnncgatt
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGCCCGCTGGTCTTCAACACCAGTTCGAGGGGTTAGTAG
CTTCTTGGGTGGGTTCGATTCCCACATATTCCCGCCA
Downstream region at tRNA end position 
taaagaaaaa
Secondary structure (Cloverleaf model)
>WENV181200176	SeC	TCA
                   t      GCCA taaagaaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          G     TTCGAGGGGTTAGTAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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