The detailed information of tRNA gene sequence


Sequence ID>WENV181200194
Genome IDOERJ01005009
Search identical group
Phylum/Class[OERJ] metagenome; water of meat washing
Species
Start position on genome 159
End posion on genome 69
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatcgatac
tRNA gene sequence 
GGAGACGTGGCTGAGTGGTCGAAAGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gattaaaaac
Secondary structure (Cloverleaf model)
>WENV181200194	Ser	GGA
                   c      GCCA gattaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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