The detailed information of tRNA gene sequence


Sequence ID>WENV181211209
Genome IDOFBJ01022396
Search identical group
Phylum/Class[OFBJ] metagenome; hydrothermal vent
Species
Start position on genome 253
End posion on genome 163
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaaacatct
tRNA gene sequence 
GGAGAAGTGGGAGAGCTGGTTTAATCCGCGCCCCTGCTAAGGGCGTGTATCCTTACGGGT
ACCGAGGGTTCAAATCCCTCATTCTCCGCCA
Downstream region at tRNA end position 
tataaaatca
Secondary structure (Cloverleaf model)
>WENV181211209	Ser	GCT
                   t      GCCA tataaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G   A          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  G         G A G G       G A G G G     C
  G           | | |                 T T
  T         A T C C
    T T A          G     TGTATCCTTACGGGTACC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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