The detailed information of tRNA gene sequence


Sequence ID>WENV181213129
Genome IDOFBU01012790
Search identical group
Phylum/Class[OFBU] metagenome; hydrothermal vent
Species
Start position on genome 464
End posion on genome 558
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtggtaaag
tRNA gene sequence 
GGGAGCGTGAGAGGGCTGGTGCCCTCCCCGGGCTTCAAACCCGGTGCACCCCCTATAAAG
GGGTGGGTGGGTTCAATTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
ggaaaccttt
Secondary structure (Cloverleaf model)
>WENV181213129	SeC	TCA
                   g      GCCA ggaaaccttt
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     C A C C C     A
      T C G        A      | | | | |     A
    G       G G A G       G T G G G     C
    G       | | | |                 T T
    T       C C T C
      G C          C     TGCACCCCCTATAAAGGGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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