The detailed information of tRNA gene sequence


Sequence ID>WENV181226117
Genome IDOFDK01000061
Search identical group
Phylum/Class[OFDK] hot springs metagenome; Yellowstone National Park, Wyoming, USA
Species
Start position on genome 42939
End posion on genome 42864
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaagcgcgc
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTGGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ttattgaaaa
Secondary structure (Cloverleaf model)
>WENV181226117	Trp	CCA
                   c      GCCA ttattgaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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